STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07506.1Lipoprotein, putative; COG2340 Uncharacterized protein with SCP/PR1 domains. (174 aa)    
Predicted Functional Partners:
EAQ06715.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
  
     0.744
EAQ06211.1
Hypothetical protein.
  
     0.738
EAQ07030.1
Hypothetical protein.
  
     0.732
EAQ06707.1
Lipoprotein, putative.
  
     0.714
EAQ07892.1
COG1376 Uncharacterized protein conserved in bacteria.
 
   
 0.708
EAQ06810.1
Rhomboid family protein; COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid).
 
     0.702
EAQ06173.1
Hypothetical protein.
  
     0.684
EAQ07062.1
Hypothetical protein.
  
     0.676
EAQ07919.1
Hypothetical protein.
  
     0.667
EAQ06922.1
Hypothetical protein.
  
     0.650
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.