Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ07539.1FxsA; COG3030 Protein affecting phage T7 exclusion by the F plasmid. (159 aa)    
Predicted Functional Partners:
hslV
ATP-dependent protease peptidase subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.
   
    0.807
EAQ07926.1
Phosphate acetyltransferase; COG0281 Malic enzyme.
    
  0.804
EAQ07520.1
Phosphate acetyltransferase; COG0281 Malic enzyme.
    
  0.804
EAQ07753.1
COG3118 Thioredoxin domain-containing protein.
   
    0.804
secB
Preprotein translocase subunit SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.
  
    0.744
EAQ07540.1
COG4395 Uncharacterized protein conserved in bacteria.
       0.696
EAQ07541.1
MltA/3D domain protein; COG2821 Membrane-bound lytic murein transglycosylase.
       0.640
EAQ07542.1
Putative Smr; COG2840 Uncharacterized protein conserved in bacteria.
       0.640
EAQ08094.1
COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
  0.561
htpX
Heat shock protein HtpX; COG0501 Zn-dependent protease with chaperone function; Belongs to the peptidase M48B family.
   
  
 0.560
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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