Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ07555.1Sensor histidine kinase PrrB (RegB); COG0642 Signal transduction histidine kinase. (489 aa)    
Predicted Functional Partners:
EAQ07556.1
Photosynthetic apparatus regulatory protein RegA; COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain.
 
 0.993
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
 
 0.958
EAQ05231.1
Dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.870
EAQ07554.1
Hypothetical protein; COG2202 FOG: PAS/PAC domain.
   
 0.774
EAQ07165.1
Sensor histidine kinase; COG0591 Na+/proline symporter.
  
 0.764
EAQ05962.1
Hypothetical protein.
  
     0.709
ribB
Bifunctional GTP cyclohydrolaseII/3,4-dihydroxy-2butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
     
  0.697
EAQ07008.1
Two component diguanylate cyclase; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
 
 0.690
EAQ07551.1
Nucleotidyltransferase family protein; COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon).
  
   0.686
EAQ06001.1
Serine/Threonine protein kinase and Signal Transduction Histidine Kinase; COG2202 FOG: PAS/PAC domain.
  
 0.672
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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