Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ07558.1Transcriptional regulator, PpsR; COG2202 FOG: PAS/PAC domain. (475 aa)    
Predicted Functional Partners:
EAQ07559.1
Regulatory protein, PpaA; COG5012 Predicted cobalamin binding protein.
 
   
 0.955
EAQ07269.1
Coenzyme B12-binding; COG5012 Predicted cobalamin binding protein.
 
   
 0.860
EAQ07033.1
Possible activator of photopigment and puc with BLUF domain.
  
 
 
 0.849
EAQ07567.1
Reaction center H protein.
 
   
 0.836
EAQ08170.1
Putative light-harvesting 1 (B870) complex assembly protein PucC.
 
     0.822
EAQ07560.1
2-vinyl bacteriochlorophyllide hydratase; COG0477 Permeases of the major facilitator superfamily.
 
   
 0.816
EAQ08171.1
COG0644 Dehydrogenases (flavoproteins).
 
     0.806
EAQ07568.1
Hypothetical protein.
 
     0.803
EAQ08169.1
Putative bacteriochlorophyll synthase, 34 kDa subunit; COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases.
 
     0.796
bchB
Light-independent protochlorophyllide reductase; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex.
 
     0.794
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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