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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07565.1Mg-protoporphyrin IX methyl transferase; COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase. (230 aa)    
Predicted Functional Partners:
bchL
Light-independent protochlorophyllide reductase iron protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP.
 
  
 0.996
EAQ07567.1
Reaction center H protein.
 
  
 0.996
EAQ07563.1
Magnesium-chelatase subunit H; COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases.
 
 
 0.994
EAQ07568.1
Hypothetical protein.
 
    0.989
acsF
Hypothetical protein; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family.
 
 
 0.989
EAQ07576.1
Magnesium-chelatase, subunit D; COG1239 Mg-chelatase subunit ChlI.
 
 0.982
EAQ07566.1
Light-harvesting 1 (B870) complex assembly; COG0477 Permeases of the major facilitator superfamily.
 
  
 0.980
EAQ07560.1
2-vinyl bacteriochlorophyllide hydratase; COG0477 Permeases of the major facilitator superfamily.
 
  
 0.977
EAQ07577.1
Magnesium-chelatase, ChlI subunit; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
 
 
 0.972
EAQ07629.1
PufL, Photosynthetic reaction center L subunit.
  
  
 0.968
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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