Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ07574.1COG3474 Cytochrome c2. (147 aa)    
Predicted Functional Partners:
EAQ07592.1
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 0.972
EAQ07590.1
COG2857 Cytochrome c1.
 
 0.959
EAQ07148.1
Formate dehydrogenase, beta subunit; COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit.
   
 
 0.933
EAQ07591.1
Ubiquinol--cytochrome c reductase, cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.921
EAQ07629.1
PufL, Photosynthetic reaction center L subunit.
   
 
 0.920
EAQ06177.1
Cbb3-type cytochrome c oxidase CcoP subunit; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
 0.914
EAQ06179.1
COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit.
 
 0.902
EAQ07567.1
Reaction center H protein.
  
 
 0.895
EAQ07630.1
PufM, photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
    
 
 0.892
EAQ06180.1
COG3278 Cbb3-type cytochrome oxidase, subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
 0.889
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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