STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07576.1Magnesium-chelatase, subunit D; COG1239 Mg-chelatase subunit ChlI. (537 aa)    
Predicted Functional Partners:
EAQ07577.1
Magnesium-chelatase, ChlI subunit; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
 0.999
EAQ07563.1
Magnesium-chelatase subunit H; COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases.
 
 0.989
EAQ07565.1
Mg-protoporphyrin IX methyl transferase; COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase.
 
 0.982
EAQ08066.1
cobN protein; COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases.
 
 0.979
EAQ07575.1
Magnesium-chelatase, BchO; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
    0.942
EAQ08169.1
Putative bacteriochlorophyll synthase, 34 kDa subunit; COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases.
 
  
 0.933
EAQ07621.1
Chlorophyll synthesis pathway, bchC; COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.
  
 
 0.925
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
 
 0.914
EAQ08171.1
COG0644 Dehydrogenases (flavoproteins).
 
  
 0.908
EAQ07578.1
Spheroidene monooxygenase.
 
  
 0.899
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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