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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07581.1COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog). (159 aa)    
Predicted Functional Partners:
EAQ07580.1
Squalene/phytoene synthase; COG1562 Phytoene/squalene synthetase.
 
  
 0.898
EAQ07578.1
Spheroidene monooxygenase.
 
  
 0.823
EAQ07579.1
COG1233 Phytoene dehydrogenase and related proteins.
 
  
 0.809
amn
AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations.
       0.688
EAQ07577.1
Magnesium-chelatase, ChlI subunit; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
  
 0.667
EAQ07576.1
Magnesium-chelatase, subunit D; COG1239 Mg-chelatase subunit ChlI.
  
  
 0.656
ade
COG1001 Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.
       0.644
EAQ07575.1
Magnesium-chelatase, BchO; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
  
 0.636
EAQ05853.1
DNA photolyase-like protein; COG0415 Deoxyribodipyrimidine photolyase.
 
  
 0.613
EAQ08169.1
Putative bacteriochlorophyll synthase, 34 kDa subunit; COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases.
  
    0.541
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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