Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ07619.1COG0142 Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family. (293 aa)    
Predicted Functional Partners:
EAQ07620.1
COG0500 SAM-dependent methyltransferases.
 0.979
EAQ07580.1
Squalene/phytoene synthase; COG1562 Phytoene/squalene synthetase.
 
 0.959
EAQ08171.1
COG0644 Dehydrogenases (flavoproteins).
 
 0.942
EAQ07617.1
Hydroxyneurosporene dehydrogenase.
 
  
 0.887
EAQ07621.1
Chlorophyll synthesis pathway, bchC; COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases.
 
 
 0.877
EAQ07358.1
Hypothetical protein; COG1562 Phytoene/squalene synthetase.
  
 0.869
EAQ06226.1
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
 
 0.847
EAQ07618.1
COG1233 Phytoene dehydrogenase and related proteins.
 
 
 0.812
EAQ07624.1
Chlorophyllide reductase, BchY subunit.
 
     0.810
EAQ07625.1
Putative chlorophyllide reductase, BchZ subunit; COG2710 Nitrogenase molybdenum-iron protein, alpha and beta chains.
 
  
 0.799
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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