STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07639.1Fatty acid desaturase family protein. (381 aa)    
Predicted Functional Partners:
EAQ05467.1
COG2124 Cytochrome P450.
  
 
 0.907
EAQ06947.1
Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
 
 0.754
EAQ07640.1
A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
       0.752
EAQ05437.1
Hypothetical protein.
  
     0.742
EAQ05438.1
COG2124 Cytochrome P450.
 
  
  0.723
EAQ07470.1
Hypothetical protein.
  
     0.658
EAQ07472.1
Hypothetical protein.
  
    0.655
EAQ07477.1
ABC transporter, permease protein; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
  
     0.651
EAQ07471.1
core-2/I-branching enzyme family protein.
  
     0.646
EAQ07473.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
    0.645
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.