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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07663.1Hypothetical protein; COG0346 Lactoylglutathione lyase and related lyases. (309 aa)    
Predicted Functional Partners:
EAQ07662.1
Hypothetical protein; COG0400 Predicted esterase.
    0.995
EAQ07066.1
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
    
 0.860
EAQ06790.1
COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
    
 0.860
EAQ05534.1
COG1171 Threonine dehydratase.
   
 
  0.715
EAQ06808.1
Hypothetical protein; COG2514 Predicted ring-cleavage extradiol dioxygenase.
 
 
 0.653
EAQ07664.1
COG1012 NAD-dependent aldehyde dehydrogenases.
  
 
  0.610
EAQ07878.1
COG1145 Ferredoxin.
  
 
 0.591
nuoI
NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 
 0.588
EAQ06781.1
COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit.
   
    0.560
nuoD
NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
  
    0.549
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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