rpsO protein (Yoonia vestfoldensis SKA53) - STRING interaction network

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Score

rpsO

Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (89 aa)

Predicted Functional Partners:

rpsI

0.998

rpsQ

0.998

rpsB

0.997

rpsC

0.997

rpsF

0.996

rpsR

0.996

EAQ06556.1

0.996

rplQ

0.996

rplM

0.995

rpsD

0.995

Your Current Organism:

Yoonia vestfoldensis SKA53

NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EAQ06556.1	rplM	SKA53_13451	SKA53_04443	COG0099 Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.997
EAQ06556.1	rplQ	SKA53_13451	SKA53_13466	COG0099 Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.	COG0203 Ribosomal protein L17.	0.996
EAQ06556.1	rpsB	SKA53_13451	SKA53_04723	COG0099 Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.	COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.997
EAQ06556.1	rpsC	SKA53_13451	SKA53_13361	COG0099 Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.997
EAQ06556.1	rpsD	SKA53_13451	SKA53_09654	COG0099 Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.998
EAQ06556.1	rpsF	SKA53_13451	SKA53_05775	COG0099 Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.991
EAQ06556.1	rpsI	SKA53_13451	SKA53_04448	COG0099 Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.	COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.994
EAQ06556.1	rpsO	SKA53_13451	SKA53_12563	COG0099 Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.996
EAQ06556.1	rpsQ	SKA53_13451	SKA53_13386	COG0099 Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.	Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.998
EAQ06556.1	rpsR	SKA53_13451	SKA53_05780	COG0099 Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.991
rplM	EAQ06556.1	SKA53_04443	SKA53_13451	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0099 Ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family.	0.997
rplM	rplQ	SKA53_04443	SKA53_13466	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0203 Ribosomal protein L17.	0.994
rplM	rpsB	SKA53_04443	SKA53_04723	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.995
rplM	rpsC	SKA53_04443	SKA53_13361	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.994
rplM	rpsD	SKA53_04443	SKA53_09654	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.995
rplM	rpsF	SKA53_04443	SKA53_05775	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.991
rplM	rpsI	SKA53_04443	SKA53_04448	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0103 Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	rpsO	SKA53_04443	SKA53_12563	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.995
rplM	rpsQ	SKA53_04443	SKA53_13386	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.995
rplM	rpsR	SKA53_04443	SKA53_05780	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.993