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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07686.1COG3806 Anti-sigma factor. (215 aa)    
Predicted Functional Partners:
EAQ07685.1
COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.999
EAQ07684.1
Putative cyclopropane/cyclopropene fatty acid synthesis protein, flavin amine oxidase; COG2907 Predicted NAD/FAD-binding protein.
 
  
 0.971
EAQ07683.1
Putative cyclopropane/cyclopropene fatty acid synthesis protein.
 
  
 0.942
EAQ07680.1
Short-chain dehydrogenase/reductase family member; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
   
 0.908
EAQ07005.1
Sigma-24; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.870
EAQ07681.1
Hypothetical protein.
 
   
 0.859
EAQ07682.1
Sugar/cation symporter, GPH family; COG2211 Na+/melibiose symporter and related transporters.
 
   
 0.834
EAQ05723.1
Probable sigD protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.806
EAQ05457.1
Cyclopropane-fatty-acyl-phospholipid synthase CfaS; COG2230 Cyclopropane fatty acid synthase and related methyltransferases.
 
   
 0.752
EAQ07679.1
Hypothetical protein.
       0.568
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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