STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07706.1COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. (310 aa)    
Predicted Functional Partners:
EAQ07705.1
Putative glutamine ABC transporter permease protein; COG0765 ABC-type amino acid transport system, permease component.
 
 0.978
EAQ07704.1
Putative ABC transporter ATP-binding protein - glutamine transport; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
  0.940
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
   
 0.882
cysC
Binfunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Catalyzes the synthesis of activated sulfate.
   
 
  0.719
EAQ06567.1
ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC; COG0765 ABC-type amino acid transport system, permease component.
 
 0.603
EAQ08009.1
COG0642 Signal transduction histidine kinase.
    
 0.586
EAQ07703.1
Hypothetical protein.
       0.584
EAQ05938.1
ABC basic amino acid transporter, ATPase subunit; COG4598 ABC-type histidine transport system, ATPase component.
 
  0.576
EAQ07707.1
Probable L-sorbosone dehydrogenase; COG2133 Glucose/sorbosone dehydrogenases.
       0.543
EAQ06568.1
Glutamate/glutamine/aspartate/asparagine ABC transporter, ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
  0.536
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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