Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ07706.1COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. (310 aa)    
Predicted Functional Partners:
EAQ07705.1
Putative glutamine ABC transporter permease protein; COG0765 ABC-type amino acid transport system, permease component.
 
 0.975
EAQ07704.1
Putative ABC transporter ATP-binding protein - glutamine transport; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 0.930
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
   
 0.840
EAQ06567.1
ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC; COG0765 ABC-type amino acid transport system, permease component.
 
 0.597
EAQ07703.1
Hypothetical protein.
       0.584
EAQ05467.1
COG2124 Cytochrome P450.
     
  0.573
EAQ06947.1
Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
     
  0.573
EAQ07707.1
Probable L-sorbosone dehydrogenase; COG2133 Glucose/sorbosone dehydrogenases.
       0.543
EAQ08009.1
COG0642 Signal transduction histidine kinase.
    
 0.532
EAQ05938.1
ABC basic amino acid transporter, ATPase subunit; COG4598 ABC-type histidine transport system, ATPase component.
 
 0.513
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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