STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07707.1Probable L-sorbosone dehydrogenase; COG2133 Glucose/sorbosone dehydrogenases. (411 aa)    
Predicted Functional Partners:
EAQ06808.1
Hypothetical protein; COG2514 Predicted ring-cleavage extradiol dioxygenase.
  
  
  0.642
EAQ07708.1
Two component Transcriptional regulator, Winged helix family; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
       0.561
EAQ07709.1
Putative periplasmic iron-binding protein; COG0642 Signal transduction histidine kinase.
       0.561
EAQ07705.1
Putative glutamine ABC transporter permease protein; COG0765 ABC-type amino acid transport system, permease component.
  
    0.544
EAQ07704.1
Putative ABC transporter ATP-binding protein - glutamine transport; COG1126 ABC-type polar amino acid transport system, ATPase component.
       0.543
EAQ07706.1
COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
       0.543
EAQ06189.1
Fructose-1,6-bisphosphate aldolase, class II; COG0191 Fructose/tagatose bisphosphate aldolase.
    
  0.512
EAQ07101.1
COG0346 Lactoylglutathione lyase and related lyases.
    
  0.503
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
     
 0.438
EAQ07703.1
Hypothetical protein.
       0.422
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.