STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07737.1Hypothetical protein. (236 aa)    
Predicted Functional Partners:
EAQ06541.1
Hypothetical protein.
  
     0.678
EAQ07736.1
COG1227 Inorganic pyrophosphatase/exopolyphosphatase.
       0.652
EAQ07735.1
HAD-superfamily subfamily IIA hydrolase; COG0647 Predicted sugar phosphatases of the HAD superfamily.
 
     0.640
EAQ07734.1
MaoC family protein; COG2030 Acyl dehydratase.
       0.448
EAQ07956.1
Hypothetical protein.
  
     0.422
EAQ06458.1
TfoX domain protein; COG3070 Regulator of competence-specific genes.
  
     0.418
EAQ06156.1
Hypothetical protein.
  
     0.405
EAQ07732.1
Hypothetical protein; Belongs to the UPF0260 family.
       0.402
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.