rpsU protein (Yoonia vestfoldensis SKA53) - STRING interaction network

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Score

rpsU

COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. (68 aa)

Predicted Functional Partners:

rplU

0.998

rplM

0.997

rpsR

0.997

rpmB

0.997

EAQ08159.1

0.997

rpsO

0.997

rpoC

0.997

rpsP

0.997

rpmH

0.996

rpmG

0.996

Your Current Organism:

Yoonia vestfoldensis SKA53

NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EAQ08159.1	rplM	SKA53_10554	SKA53_04443	COG0268 Ribosomal protein S20.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.998
EAQ08159.1	rplU	SKA53_10554	SKA53_04353	COG0268 Ribosomal protein S20.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.998
EAQ08159.1	rpmB	SKA53_10554	SKA53_09474	COG0268 Ribosomal protein S20.	COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.998
EAQ08159.1	rpmG	SKA53_10554	SKA53_01521	COG0268 Ribosomal protein S20.	COG0267 Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.996
EAQ08159.1	rpmH	SKA53_10554	SKA53_00405	COG0268 Ribosomal protein S20.	COG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.997
EAQ08159.1	rpoC	SKA53_10554	SKA53_13278	COG0268 Ribosomal protein S20.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
EAQ08159.1	rpsO	SKA53_10554	SKA53_12563	COG0268 Ribosomal protein S20.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.997
EAQ08159.1	rpsP	SKA53_10554	SKA53_14991	COG0268 Ribosomal protein S20.	COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.997
EAQ08159.1	rpsR	SKA53_10554	SKA53_05780	COG0268 Ribosomal protein S20.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.996
EAQ08159.1	rpsU	SKA53_10554	SKA53_13028	COG0268 Ribosomal protein S20.	COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.997
rplM	EAQ08159.1	SKA53_04443	SKA53_10554	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0268 Ribosomal protein S20.	0.998
rplM	rplU	SKA53_04443	SKA53_04353	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.999
rplM	rpmB	SKA53_04443	SKA53_09474	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.997
rplM	rpmG	SKA53_04443	SKA53_01521	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0267 Ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.997
rplM	rpmH	SKA53_04443	SKA53_00405	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0230 Ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.	0.995
rplM	rpoC	SKA53_04443	SKA53_13278	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
rplM	rpsO	SKA53_04443	SKA53_12563	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.999
rplM	rpsP	SKA53_04443	SKA53_14991	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.998
rplM	rpsR	SKA53_04443	SKA53_05780	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.998
rplM	rpsU	SKA53_04443	SKA53_13028	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.997