rpsU protein (Yoonia vestfoldensis SKA53) - STRING interaction network

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rpsU

COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. (68 aa)

Predicted Functional Partners:

rpoC

0.992

rpmB

0.991

EAQ08159.1

0.991

rpsP

0.991

rpsO

0.989

rplU

0.988

rplS

0.987

rplM

0.986

rpsB

0.986

rpmI

0.986

Your Current Organism:

Yoonia vestfoldensis SKA53

NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EAQ08159.1	rplM	SKA53_10554	SKA53_04443	COG0268 Ribosomal protein S20.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.991
EAQ08159.1	rplS	SKA53_10554	SKA53_14971	COG0268 Ribosomal protein S20.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.985
EAQ08159.1	rplU	SKA53_10554	SKA53_04353	COG0268 Ribosomal protein S20.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.992
EAQ08159.1	rpmB	SKA53_10554	SKA53_09474	COG0268 Ribosomal protein S20.	COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.991
EAQ08159.1	rpmI	SKA53_10554	SKA53_10224	COG0268 Ribosomal protein S20.	COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.960
EAQ08159.1	rpoC	SKA53_10554	SKA53_13278	COG0268 Ribosomal protein S20.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.994
EAQ08159.1	rpsB	SKA53_10554	SKA53_04723	COG0268 Ribosomal protein S20.	COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.987
EAQ08159.1	rpsO	SKA53_10554	SKA53_12563	COG0268 Ribosomal protein S20.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.991
EAQ08159.1	rpsP	SKA53_10554	SKA53_14991	COG0268 Ribosomal protein S20.	COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.990
EAQ08159.1	rpsU	SKA53_10554	SKA53_13028	COG0268 Ribosomal protein S20.	COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.991
rplM	EAQ08159.1	SKA53_04443	SKA53_10554	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0268 Ribosomal protein S20.	0.991
rplM	rplS	SKA53_04443	SKA53_14971	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.992
rplM	rplU	SKA53_04443	SKA53_04353	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.995
rplM	rpmB	SKA53_04443	SKA53_09474	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.989
rplM	rpmI	SKA53_04443	SKA53_10224	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.991
rplM	rpoC	SKA53_04443	SKA53_13278	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.996
rplM	rpsB	SKA53_04443	SKA53_04723	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.995
rplM	rpsO	SKA53_04443	SKA53_12563	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.995
rplM	rpsP	SKA53_04443	SKA53_14991	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.992
rplM	rpsU	SKA53_04443	SKA53_13028	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.986