Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ07784.1Two-component transcriptional regulator, winged helix family; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (215 aa)    
Predicted Functional Partners:
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
 
 0.986
EAQ07785.1
COG0642 Signal transduction histidine kinase.
 
 0.982
EAQ08009.1
COG0642 Signal transduction histidine kinase.
 
 0.890
EAQ06370.1
Probable two-component sensor histidine kinase; COG0642 Signal transduction histidine kinase.
 
 0.888
EAQ06261.1
COG0642 Signal transduction histidine kinase.
 
 0.794
EAQ07786.1
Putative kinase/phosphatase; COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism.
       0.764
EAQ07787.1
Hypothetical protein; Displays ATPase and GTPase activities.
       0.764
EAQ07788.1
PTS system IIA component, Man family; COG2893 Phosphotransferase system, mannose/fructose-specific component IIA.
       0.764
EAQ07789.1
Phosphocarrier protein HPr; COG1925 Phosphotransferase system, HPr-related proteins.
       0.764
EAQ07148.1
Formate dehydrogenase, beta subunit; COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit.
   
   0.752
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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