Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ07788.1PTS system IIA component, Man family; COG2893 Phosphotransferase system, mannose/fructose-specific component IIA. (131 aa)    
Predicted Functional Partners:
EAQ07789.1
Phosphocarrier protein HPr; COG1925 Phosphotransferase system, HPr-related proteins.
 
 
 0.996
EAQ07469.1
PTS IIA-like nitrogen-regulatory protein PtsN; COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
 
 
 0.911
EAQ07786.1
Putative kinase/phosphatase; COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism.
 
   
 0.900
EAQ07787.1
Hypothetical protein; Displays ATPase and GTPase activities.
 
   
 0.879
EAQ07715.1
Mannose-6-phosphate isomerase /; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.868
EAQ07785.1
COG0642 Signal transduction histidine kinase.
       0.846
EAQ07017.1
Putative Fructokinase; COG0524 Sugar kinases, ribokinase family.
    
 0.821
EAQ07784.1
Two-component transcriptional regulator, winged helix family; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
       0.764
EAQ05396.1
Hypothetical protein; COG1940 Transcriptional regulator/sugar kinase.
    
 0.732
EAQ05825.1
Xylose operon repressor; COG1940 Transcriptional regulator/sugar kinase.
    
 0.732
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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