Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07793.1COG2086 Electron transfer flavoprotein, beta subunit. (252 aa)    
Predicted Functional Partners:
EAQ07792.1
COG2025 Electron transfer flavoprotein, alpha subunit.
 0.999
EAQ06676.1
Electrotransfer ubiquinone oxidoreductase family protein; Accepts electrons from ETF and reduces ubiquinone.
 
 0.998
EAQ06266.1
N-methylproline demethylase, putative; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
 0.964
EAQ07315.1
COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits.
  
 
 0.909
EAQ06632.1
COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
 0.892
EAQ07916.1
enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /3-hydroxybutyryl-CoA epimerase; COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
 
 0.881
EAQ05589.1
COG1960 Acyl-CoA dehydrogenases.
 
 
 0.877
EAQ05467.1
COG2124 Cytochrome P450.
  
 
 0.863
EAQ06712.1
COG1960 Acyl-CoA dehydrogenases.
 
 
 0.863
EAQ07878.1
COG1145 Ferredoxin.
  
 0.856
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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