Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07795.1Hypothetical protein. (68 aa)    
Predicted Functional Partners:
EAQ07794.1
Hypothetical protein; Belongs to the Cob(I)alamin adenosyltransferase family.
  
    0.855
EAQ05850.1
Hypothetical protein.
  
     0.755
EAQ05832.1
COG5488 Integral membrane protein.
  
     0.660
EAQ07792.1
COG2025 Electron transfer flavoprotein, alpha subunit.
       0.658
EAQ07793.1
COG2086 Electron transfer flavoprotein, beta subunit.
       0.658
parC
DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.
       0.623
EAQ07796.1
Oxidoreductase, short-chain dehydrogenase/reductase family; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.594
EAQ05930.1
Hypothetical protein.
  
     0.565
EAQ07320.1
Hypothetical protein; COG3926 putative secretion activating protein.
  
     0.559
EAQ07131.1
Hypothetical protein.
  
     0.550
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.