STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ07802.1Hypothetical protein. (297 aa)    
Predicted Functional Partners:
secE
Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
       0.685
EAQ06653.1
Hypothetical protein.
  
     0.647
EAQ08130.1
Hypothetical protein; COG2183 Transcriptional accessory protein.
  
     0.526
EAQ06635.1
Dihydroxy-acid dehydratase; COG1157 Flagellar biosynthesis/type III secretory pathway ATPase.
  
     0.517
EAQ06784.1
Hypothetical protein.
  
     0.510
EAQ07658.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.493
EAQ07276.1
Hypothetical protein.
  
     0.480
EAQ07547.1
Hypothetical protein.
  
     0.466
EAQ08033.1
Transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.435
EAQ06078.1
Hypothetical protein.
  
     0.430
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.