Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ06564.1Hypothetical protein; COG5387 Chaperone required for the assembly of the mitochondrial F1-ATPase. (241 aa)    
Predicted Functional Partners:
EAQ06562.1
Ribosomal large subunit pseudouridine synthase C; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
 
     0.896
crcB
Hypothetical protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
       0.853
EAQ06563.1
HAD-superfamily hydrolase, subfamily IA, variant 1; COG0546 Predicted phosphatases.
       0.853
atpA
ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
 
 0.806
EAQ06560.1
ATPase, AAA family; COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase.
       0.785
atpD
ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.732
rplQ
COG0203 Ribosomal protein L17.
  
    0.662
EAQ07503.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
  
     0.641
EAQ06565.1
Glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
       0.638
EAQ05548.1
NADH-ubiquinone oxidoreductase family protein.
  
     0.614
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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