Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAQ06581.1COG0589 Universal stress protein UspA and related nucleotide-binding proteins. (286 aa)    
Predicted Functional Partners:
EAQ06580.1
Antisigma-factor antagonist, STAS; COG0659 Sulfate permease and related transporters (MFS superfamily).
 
   
 0.962
EAQ06583.1
Hypothetical protein; COG0471 Di- and tricarboxylate transporters.
 
    0.494
EAQ07165.1
Sensor histidine kinase; COG0591 Na+/proline symporter.
  
   
 0.465
EAQ06879.1
ADA regulatory protein; COG2207 AraC-type DNA-binding domain-containing proteins.
   
    0.458
EAQ06579.1
COG1052 Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.436
EAQ06582.1
Hypothetical protein; COG0471 Di- and tricarboxylate transporters.
  
    0.420
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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