STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06582.1Hypothetical protein; COG0471 Di- and tricarboxylate transporters. (288 aa)    
Predicted Functional Partners:
EAQ06583.1
Hypothetical protein; COG0471 Di- and tricarboxylate transporters.
     0.994
EAQ05526.1
pH adaption potassium efflux system protein PhaA; COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit.
  
  
 0.527
EAQ06580.1
Antisigma-factor antagonist, STAS; COG0659 Sulfate permease and related transporters (MFS superfamily).
  
  
 0.478
EAQ06581.1
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
  
    0.422
EAQ07926.1
Phosphate acetyltransferase; COG0281 Malic enzyme.
  
    0.408
EAQ07520.1
Phosphate acetyltransferase; COG0281 Malic enzyme.
  
    0.408
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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