STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06590.1Probable deoxyribodipyrimidine photolyase; COG3380 Predicted NAD/FAD-dependent oxidoreductase. (312 aa)    
Predicted Functional Partners:
EAQ06589.1
COG2020 putative protein-S-isoprenylcysteine methyltransferase.
 
     0.893
EAQ06591.1
Putative ubiquinol-cytochrome-c reductase assembly protein; COG0661 Predicted unusual protein kinase.
 
     0.862
EAQ06586.1
Hypothetical protein.
 
     0.855
EAQ06588.1
3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway. Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
 
     0.836
EAQ06587.1
3-demethylubiquinone-9 3-methyltransferase; COG0477 Permeases of the major facilitator superfamily.
 
     0.806
EAQ07576.1
Magnesium-chelatase, subunit D; COG1239 Mg-chelatase subunit ChlI.
     
  0.804
EAQ05985.1
Hypothetical protein.
  
     0.555
EAQ06584.1
Putative Na+/H+ antiporter with cyclic nucleotide-binding domain; COG0025 NhaP-type Na+/H+ and K+/H+ antiporters.
       0.541
EAQ06592.1
Hypothetical protein; COG1573 Uracil-DNA glycosylase.
       0.533
EAQ06593.1
COG4277 Predicted DNA-binding protein with the Helix-hairpin-helix motif.
       0.533
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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