STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06592.1Hypothetical protein; COG1573 Uracil-DNA glycosylase. (475 aa)    
Predicted Functional Partners:
EAQ06593.1
COG4277 Predicted DNA-binding protein with the Helix-hairpin-helix motif.
 
     0.965
EAQ06726.1
Hypothetical protein; COG1573 Uracil-DNA glycosylase.
  
  
 
0.885
EAQ06594.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.563
EAQ06805.1
Protease, putative; COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone.
  
    0.537
EAQ06586.1
Hypothetical protein.
       0.533
EAQ06587.1
3-demethylubiquinone-9 3-methyltransferase; COG0477 Permeases of the major facilitator superfamily.
       0.533
EAQ06588.1
3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway. Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
       0.533
EAQ06589.1
COG2020 putative protein-S-isoprenylcysteine methyltransferase.
       0.533
EAQ06590.1
Probable deoxyribodipyrimidine photolyase; COG3380 Predicted NAD/FAD-dependent oxidoreductase.
       0.533
EAQ06591.1
Putative ubiquinol-cytochrome-c reductase assembly protein; COG0661 Predicted unusual protein kinase.
       0.533
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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