STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06600.1Hypothetical protein; COG0699 Predicted GTPases (dynamin-related). (695 aa)    
Predicted Functional Partners:
EAQ06599.1
Hypothetical protein; COG0699 Predicted GTPases (dynamin-related).
 
   
 0.960
EAQ06601.1
Hypothetical protein; COG0699 Predicted GTPases (dynamin-related).
 
     0.891
EAQ06603.1
Hypothetical protein; COG1716 FOG: FHA domain.
 
    0.891
EAQ06602.1
COG0631 Serine/threonine protein phosphatase.
 
     0.878
gpsA
COG0240 Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
  
 0.870
EAQ06604.1
COG0515 Serine/threonine protein kinase.
 
     0.850
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
  
    0.785
EAQ05497.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
   
    0.741
EAQ06526.1
LysM domain protein; COG1652 Uncharacterized protein containing LysM domain.
  
     0.691
EAQ08167.1
Hypothetical protein.
  
     0.665
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.