Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
EAQ06603.1Hypothetical protein; COG1716 FOG: FHA domain. (274 aa)    
Predicted Functional Partners:
EAQ06604.1
COG0515 Serine/threonine protein kinase.
 
 
 
 0.983
EAQ06601.1
Hypothetical protein; COG0699 Predicted GTPases (dynamin-related).
 
 
 0.964
EAQ06602.1
COG0631 Serine/threonine protein phosphatase.
 
 
 0.963
EAQ06600.1
Hypothetical protein; COG0699 Predicted GTPases (dynamin-related).
 
     0.885
EAQ06599.1
Hypothetical protein; COG0699 Predicted GTPases (dynamin-related).
 
     0.883
EAQ06770.1
COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes.
    
 
 0.879
EAQ06061.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
  
 
 0.858
ribB
Bifunctional GTP cyclohydrolaseII/3,4-dihydroxy-2butanone-4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
 0.821
EAQ05724.1
Hypothetical protein; COG5572 Predicted integral membrane protein.
   
    0.821
EAQ07421.1
Flagellar motor switch FliN protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
  
 
 0.820
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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