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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06607.1COG0842 ABC-type multidrug transport system, permease component. (253 aa)    
Predicted Functional Partners:
EAQ06606.1
ABC transporter, ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
 
 0.983
EAQ06887.1
ABC transporter, ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
 
 0.915
EAQ06608.1
Peptidase, family S49; COG0616 Periplasmic serine proteases (ClpP class).
       0.689
EAQ06609.1
Short chain dehydrogenase.
       0.651
EAQ06610.1
Oxidoreductase, short chain dehydrogenase/reductase family; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
       0.600
EAQ07961.1
Hypothetical protein; COG0778 Nitroreductase.
  
  
 0.599
EAQ07477.1
ABC transporter, permease protein; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
    
  0.596
EAQ07987.1
Twin-arginine translocation pathway signal sequence domain protein; COG2217 Cation transport ATPase.
  
  
 0.593
EAQ06637.1
CAAX amino terminal protease family protein; COG1266 Predicted metal-dependent membrane protease.
   
  
 0.542
EAQ06605.1
Glyceraldehyde-3-phosphate dehydrogenase, type I; COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
       0.515
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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