STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06619.1Hypothetical protein. (55 aa)    
Predicted Functional Partners:
EAQ05864.1
Hypothetical protein.
  
     0.735
EAQ06621.1
Hypothetical protein.
 
     0.732
EAQ06620.1
N-6 Adenine-specific DNA methylase; COG4123 Predicted O-methyltransferase; Belongs to the methyltransferase superfamily.
       0.684
EAQ06622.1
Decaprenyl diphosphate synthase; COG0142 Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
       0.596
EAQ07454.1
Hypothetical protein.
  
     0.515
EAQ06716.1
OmpA domain protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
     0.514
EAQ07848.1
COG4642 Uncharacterized protein conserved in bacteria.
  
     0.503
EAQ06375.1
Hypothetical protein.
  
     0.476
EAQ05835.1
Glycosyltransferase, family 2; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
  
     0.417
EAQ08165.1
COG3144 Flagellar hook-length control protein.
  
     0.401
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.