STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06633.1Hypothetical protein. (121 aa)    
Predicted Functional Partners:
EAQ06634.1
Hypothetical protein.
 
     0.964
EAQ06635.1
Dihydroxy-acid dehydratase; COG1157 Flagellar biosynthesis/type III secretory pathway ATPase.
 
     0.812
EAQ06958.1
Hypothetical protein.
  
     0.771
EAQ05914.1
Hypothetical protein.
  
     0.767
EAQ06885.1
epsK domain protein.
  
     0.767
EAQ06884.1
Hypothetical protein.
  
     0.764
EAQ07471.1
core-2/I-branching enzyme family protein.
  
     0.744
EAQ07470.1
Hypothetical protein.
  
     0.740
EAQ07472.1
Hypothetical protein.
  
     0.735
EAQ06838.1
Hypothetical protein.
  
     0.729
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.