STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06635.1Dihydroxy-acid dehydratase; COG1157 Flagellar biosynthesis/type III secretory pathway ATPase. (194 aa)    
Predicted Functional Partners:
ilvD
COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; Belongs to the IlvD/Edd family.
       0.799
EAQ06633.1
Hypothetical protein.
 
     0.785
EAQ06634.1
Hypothetical protein.
       0.756
EAQ05667.1
Hypothetical protein.
  
     0.715
EAQ08130.1
Hypothetical protein; COG2183 Transcriptional accessory protein.
  
     0.698
EAQ06640.1
Hypothetical protein.
 
     0.674
EAQ06637.1
CAAX amino terminal protease family protein; COG1266 Predicted metal-dependent membrane protease.
       0.636
EAQ05273.1
Possible transcriptional activator; COG2771 DNA-binding HTH domain-containing proteins.
  
     0.606
EAQ06078.1
Hypothetical protein.
  
     0.603
EAQ08213.1
Hypothetical protein.
  
     0.600
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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