STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06640.1Hypothetical protein. (168 aa)    
Predicted Functional Partners:
EAQ06639.1
folC bifunctional protein; COG0285 Folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.
       0.820
EAQ08130.1
Hypothetical protein; COG2183 Transcriptional accessory protein.
  
     0.752
accD
acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
       0.738
EAQ06317.1
Hypothetical protein.
  
     0.713
EAQ06635.1
Dihydroxy-acid dehydratase; COG1157 Flagellar biosynthesis/type III secretory pathway ATPase.
 
     0.674
EAQ05271.1
Autoinducer synthesis protein; COG3916 N-acyl-L-homoserine lactone synthetase.
  
     0.658
EAQ06509.1
Hypothetical protein.
  
     0.627
EAQ06784.1
Hypothetical protein.
  
     0.606
EAQ07166.1
Possible flagellar switch protein FliM; COG0477 Permeases of the major facilitator superfamily.
  
     0.592
EAQ07782.1
Phosphoenolpyruvate carboxykinase.
  
     0.571
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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