STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06647.1COG2154 Pterin-4a-carbinolamine dehydratase. (99 aa)    
Predicted Functional Partners:
EAQ06648.1
COG3146 Uncharacterized protein conserved in bacteria.
  
    0.857
EAQ06646.1
Mechanosensitive ion channel family protein; COG0668 Small-conductance mechanosensitive channel.
       0.836
EAQ06649.1
COG0584 Glycerophosphoryl diester phosphodiesterase.
   
   0.806
EAQ06650.1
Hypothetical protein; COG0251 putative translation initiation inhibitor, yjgF family.
  
    0.786
EAQ06652.1
COG4618 ABC-type protease/lipase transport system, ATPase and permease components.
       0.684
EAQ06744.1
COG1448 Aspartate/tyrosine/aromatic aminotransferase.
  
  
 0.662
EAQ05758.1
Hypothetical protein; COG1082 Sugar phosphate isomerases/epimerases.
  
  
 0.647
EAQ06651.1
Type I secretion membrane fusion protein, HlyD family; COG0845 Membrane-fusion protein.
       0.624
EAQ06898.1
Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
   
    0.504
EAQ06653.1
Hypothetical protein.
       0.433
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.