Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EAQ06649.1COG0584 Glycerophosphoryl diester phosphodiesterase. (250 aa)    
Predicted Functional Partners:
EAQ07138.1
Hydrolase, alpha/beta fold family; COG2267 Lysophospholipase.
 
  
 0.871
EAQ07272.1
COG0584 Glycerophosphoryl diester phosphodiesterase.
     
 0.846
EAQ06650.1
Hypothetical protein; COG0251 putative translation initiation inhibitor, yjgF family.
       0.814
EAQ06647.1
COG2154 Pterin-4a-carbinolamine dehydratase.
       0.791
EAQ06648.1
COG3146 Uncharacterized protein conserved in bacteria.
       0.791
EAQ06646.1
Mechanosensitive ion channel family protein; COG0668 Small-conductance mechanosensitive channel.
       0.759
EAQ06652.1
COG4618 ABC-type protease/lipase transport system, ATPase and permease components.
       0.744
EAQ06651.1
Type I secretion membrane fusion protein, HlyD family; COG0845 Membrane-fusion protein.
       0.669
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
  
  
 0.657
EAQ05288.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
 
 0.599
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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