Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ06670.1Oxidoreductase, zinc-binding dehydrogenase family; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases. (341 aa)    
Predicted Functional Partners:
EAQ06669.1
Exodeoxyribonuclease III, putative; COG0708 Exonuclease III.
       0.783
EAQ06668.1
L-asparaginase, thermolabile family; COG4448 L-asparaginase II.
       0.705
EAQ07916.1
enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase /3-hydroxybutyryl-CoA epimerase; COG1024 Enoyl-CoA hydratase/carnithine racemase.
  
 0.567
EAQ05467.1
COG2124 Cytochrome P450.
   
 
 0.540
rsfS
Iojap-related protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
       0.532
rlmH
Hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
       0.532
EAQ07608.1
Hypothetical protein.
  
     0.517
EAQ06601.1
Hypothetical protein; COG0699 Predicted GTPases (dynamin-related).
  
 
   0.506
EAQ07174.1
Hypothetical protein; COG3173 Predicted aminoglycoside phosphotransferase.
 
  0.499
EAQ07315.1
COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits.
     
 0.484
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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