Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ06688.1Carbonic anhydrase, putative; COG0288 Carbonic anhydrase. (215 aa)    
Predicted Functional Partners:
EAQ06372.1
Predicted ferripyochelin binding protein; COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily.
    
 0.926
EAQ06686.1
COG0347 Nitrogen regulatory protein PII.
       0.837
EAQ06687.1
Membrane protein; COG3329 Predicted permease.
     
 0.798
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.758
EAQ06580.1
Antisigma-factor antagonist, STAS; COG0659 Sulfate permease and related transporters (MFS superfamily).
  
 
 0.672
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 
 0.476
EAQ05538.1
Oxidoreductase, molybdopterin-binding; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
    0.444
EAQ07827.1
SlyX protein, putative; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
  
     0.427
EAQ08212.1
Glutamine-pyruvate aminotransferase; COG0067 Glutamate synthase domain 1.
  
  
 0.424
EAQ05465.1
Probable high affinity sulfate transporter (SulP); COG0659 Sulfate permease and related transporters (MFS superfamily).
  
 
 0.423
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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