Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ06711.1Metallo-beta-lactamase family protein; COG0491 Zn-dependent hydrolases, including glyoxylases. (346 aa)    
Predicted Functional Partners:
EAQ06712.1
COG1960 Acyl-CoA dehydrogenases.
 
    0.829
EAQ06713.1
Sua5/YciO/YrdC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
       0.701
EAQ07101.1
COG0346 Lactoylglutathione lyase and related lyases.
   
  0.451
EAQ05528.1
COG3108 Uncharacterized protein conserved in bacteria.
   
    0.451
EAQ07437.1
Tat (twin-arginine translocation) pathway signal sequence domain protein; COG3108 Uncharacterized protein conserved in bacteria.
   
    0.451
EAQ06206.1
COG0236 Acyl carrier protein.
  
 
   0.446
ihfA
Histone-like DNA-binding protein (IHF); This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.
  
    0.438
EAQ07170.1
Metallo-beta-lactamase family protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
    
 0.432
EAQ06323.1
Rhodanese domain protein; COG0607 Rhodanese-related sulfurtransferase.
  
 0.431
EAQ08103.1
Hypothetical protein; COG0607 Rhodanese-related sulfurtransferase.
  
 0.431
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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