Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06740.1Cell division permease protein FtsX, putative. (297 aa)    
Predicted Functional Partners:
EAQ06739.1
Cell division ATP-binding protein FtsE; COG2884 Predicted ATPase involved in cell division.
 
 
 0.999
EAQ06674.1
Hypothetical protein; COG4942 Membrane-bound metallopeptidase.
 
 
 
 0.972
EAQ06741.1
COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
       0.853
EAQ06690.1
Hypothetical protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
 
 
 
 0.787
EAQ05236.1
Hypothetical protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
   
 
 0.759
EAQ06738.1
COG0810 Periplasmic protein TonB, links inner and outer membranes.
       0.683
ftsQ
Cell division septal protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
 
 
 0.631
EAQ06885.1
epsK domain protein.
  
     0.623
EAQ07284.1
N-acetylmuramoyl-L-alanine amidase, family 3; COG0860 N-acetylmuramoyl-L-alanine amidase.
 
   
 0.594
EAQ06464.1
COG2927 DNA polymerase III, chi subunit.
  
   
 0.586
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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