STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pxpAHypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (252 aa)    
Predicted Functional Partners:
EAQ06754.1
Urea amidolyase-like protein; COG1984 Allophanate hydrolase subunit 2.
 
 
 0.999
EAQ06755.1
COG2049 Allophanate hydrolase subunit 1.
 
 
 0.999
EAQ06935.1
Bifunctional PutA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 
  0.934
EAQ06752.1
COG3257 Uncharacterized protein, possibly involved in glyoxylate utilization.
       0.752
EAQ05267.1
COG0174 Glutamine synthetase.
   
 
  0.671
EAQ05942.1
COG0174 Glutamine synthetase.
   
 
  0.671
EAQ05944.1
COG0174 Glutamine synthetase.
   
 
  0.671
EAQ08110.1
COG0174 Glutamine synthetase.
   
 
  0.671
EAQ07165.1
Sensor histidine kinase; COG0591 Na+/proline symporter.
  
    0.648
EAQ07326.1
COG0372 Citrate synthase; Belongs to the citrate synthase family.
   
    0.611
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.