STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06763.1Hypothetical protein. (108 aa)    
Predicted Functional Partners:
EAQ06764.1
Hypothetical protein; COG1451 Predicted metal-dependent hydrolase.
       0.716
EAQ06872.1
ATP synthase F0, subunit I; A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex.
  
     0.620
EAQ06765.1
Transcriptional regulator, GntR family; COG1802 Transcriptional regulators.
       0.557
EAQ05866.1
DnaJ domain protein; COG2214 DnaJ-class molecular chaperone.
  
     0.522
efp
Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
   
    0.461
EAQ06737.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
  
     0.457
EAQ06715.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
  
     0.413
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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