Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06776.1Hypothetical protein. (94 aa)    
Predicted Functional Partners:
EAQ06778.1
NnrU family protein; COG4094 Predicted membrane protein.
       0.673
EAQ06779.1
Hypothetical protein; COG5515 Uncharacterized conserved small protein.
       0.671
EAQ06780.1
MaoC family protein; COG2030 Acyl dehydratase.
       0.642
EAQ06777.1
COG2301 Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
       0.520
EAQ06156.1
Hypothetical protein.
  
     0.494
EAQ05912.1
Hypothetical protein.
  
     0.492
EAQ06541.1
Hypothetical protein.
  
     0.469
EAQ05920.1
Hypothetical protein.
  
     0.448
EAQ06728.1
Efflux transporter, RND family, MFP subunit; COG0845 Membrane-fusion protein.
  
     0.428
EAQ05445.1
COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
  
     0.406
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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