STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06779.1Hypothetical protein; COG5515 Uncharacterized conserved small protein. (67 aa)    
Predicted Functional Partners:
EAQ06778.1
NnrU family protein; COG4094 Predicted membrane protein.
  
    0.860
EAQ06780.1
MaoC family protein; COG2030 Acyl dehydratase.
       0.855
EAQ06777.1
COG2301 Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
       0.817
EAQ06776.1
Hypothetical protein.
       0.629
EAQ06781.1
COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit.
       0.618
EAQ06782.1
COG2142 Succinate dehydrogenase, hydrophobic anchor subunit.
       0.603
EAQ06783.1
COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
       0.561
EAQ07131.1
Hypothetical protein.
  
     0.466
EAQ06784.1
Hypothetical protein.
       0.448
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.