Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06784.1Hypothetical protein. (91 aa)    
Predicted Functional Partners:
EAQ06783.1
COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
       0.852
EAQ06782.1
COG2142 Succinate dehydrogenase, hydrophobic anchor subunit.
       0.811
EAQ06781.1
COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit.
       0.795
EAQ08130.1
Hypothetical protein; COG2183 Transcriptional accessory protein.
  
     0.758
EAQ06694.1
Hypothetical protein; COG0621 2-methylthioadenine synthetase.
  
     0.732
EAQ06078.1
Hypothetical protein.
  
     0.721
EAQ06509.1
Hypothetical protein.
  
     0.692
EAQ06653.1
Hypothetical protein.
  
     0.685
EAQ08213.1
Hypothetical protein.
  
     0.668
EAQ07658.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
  
     0.664
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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