Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ06804.1Ribosomal-protein-alanine acetyltransferase, putative; COG0456 Acetyltransferases. (139 aa)    
Predicted Functional Partners:
EAQ06805.1
Protease, putative; COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone.
  
 
 0.897
EAQ06806.1
nifU domain protein; COG0694 Thioredoxin-like proteins and domains.
       0.826
EAQ06807.1
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
       0.687
EAQ06803.1
COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein.
       0.641
EAQ05534.1
COG1171 Threonine dehydratase.
     
  0.627
EAQ06801.1
Sugar ABC transporter, permease protein; COG4603 ABC-type uncharacterized transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
       0.575
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.538
EAQ08084.1
DNA-binding protein, putative; COG1396 Predicted transcriptional regulators.
    
 0.521
EAQ06796.1
Hypothetical protein.
       0.480
EAQ06797.1
Membrane protein; COG0730 Predicted permeases.
       0.479
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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