rsmI protein (Yoonia vestfoldensis SKA53) - STRING interaction network

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rsmI

Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. (286 aa)

Predicted Functional Partners:

EAQ06815.1

0.853

rpsR

0.846

rpsN

0.812

rpsF

0.811

rpsU

0.807

rpsC

0.803

rpsP

0.787

rpsQ

0.778

rpsS

0.777

rpsJ

0.775

Your Current Organism:

Yoonia vestfoldensis SKA53

NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EAQ06815.1	rsmI	SKA53_14746	SKA53_14741	Hypothetical protein; COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase; Belongs to the UPF0102 family.	Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.	0.853
rpsC	rpsF	SKA53_13361	SKA53_05775	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.995
rpsC	rpsJ	SKA53_13361	SKA53_13323	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.998
rpsC	rpsN	SKA53_13361	SKA53_13406	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.996
rpsC	rpsP	SKA53_13361	SKA53_14991	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.989
rpsC	rpsQ	SKA53_13361	SKA53_13386	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.999
rpsC	rpsR	SKA53_13361	SKA53_05780	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.996
rpsC	rpsS	SKA53_13361	SKA53_13351	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999
rpsC	rpsU	SKA53_13361	SKA53_13028	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.942
rpsC	rsmI	SKA53_13361	SKA53_14741	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.	0.803
rpsF	rpsC	SKA53_05775	SKA53_13361	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.995
rpsF	rpsJ	SKA53_05775	SKA53_13323	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.995
rpsF	rpsN	SKA53_05775	SKA53_13406	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.994
rpsF	rpsP	SKA53_05775	SKA53_14991	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	COG0228 Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.995
rpsF	rpsQ	SKA53_05775	SKA53_13386	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.995
rpsF	rpsR	SKA53_05775	SKA53_05780	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.999
rpsF	rpsS	SKA53_05775	SKA53_13351	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.991
rpsF	rpsU	SKA53_05775	SKA53_13028	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.985
rpsF	rsmI	SKA53_05775	SKA53_14741	Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.	0.811
rpsJ	rpsC	SKA53_13323	SKA53_13361	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.998