STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Coexpression
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[Homology]
Score
EAQ06832.1Oxidoreductase, aldo/keto reductase family; COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases). (310 aa)    
Predicted Functional Partners:
EAQ06831.1
Putative FAD-dependent glycerol-3-phosphate dehydrogenase protein; COG0665 Glycine/D-amino acid oxidases (deaminating).
       0.791
EAQ05288.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
    
 
 0.694
EAQ06830.1
Hypothetical protein.
       0.586
EAQ06834.1
D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D- alanine-endopeptidase; COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4).
       0.512
nadD
Nicotinic acid mononucleotide adenyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
       0.506
EAQ06096.1
Putative Acetoin utilization protein; COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein.
   
  0.492
EAQ07960.1
Deacetylase / probable acetylpolyamine aminohydrolase; COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein.
   
  0.492
EAQ08202.1
COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein.
   
  0.492
EAQ08150.1
Heat shock protein, Hsp70 family; COG0443 Molecular chaperone.
  
  0.461
trpA
Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
     
 0.456
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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