Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAQ06855.1 | EAQ06856.1 | SKA53_14946 | SKA53_14951 | Hypothetical protein; COG1192 ATPases involved in chromosome partitioning. | Hypothetical protein; COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases. | 0.541 |
EAQ06855.1 | EAQ06857.1 | SKA53_14946 | SKA53_14956 | Hypothetical protein; COG1192 ATPases involved in chromosome partitioning. | DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases. | 0.520 |
EAQ06856.1 | EAQ06855.1 | SKA53_14951 | SKA53_14946 | Hypothetical protein; COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases. | Hypothetical protein; COG1192 ATPases involved in chromosome partitioning. | 0.541 |
EAQ06856.1 | EAQ06857.1 | SKA53_14951 | SKA53_14956 | Hypothetical protein; COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases. | DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases. | 0.732 |
EAQ06857.1 | EAQ06855.1 | SKA53_14956 | SKA53_14946 | DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases. | Hypothetical protein; COG1192 ATPases involved in chromosome partitioning. | 0.520 |
EAQ06857.1 | EAQ06856.1 | SKA53_14956 | SKA53_14951 | DEAD/DEAH box helicase; COG0513 Superfamily II DNA and RNA helicases. | Hypothetical protein; COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases. | 0.732 |