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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ06877.1Pyruvate dehydrogenase complex repressor; COG2186 Transcriptional regulators. (255 aa)    
Predicted Functional Partners:
EAQ05467.1
COG2124 Cytochrome P450.
    
  0.744
EAQ06947.1
Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
    
  0.738
EAQ06052.1
Regulatory protein GntR, HTH:GntR, C-terminal; COG1802 Transcriptional regulators.
  
  
 0.640
EAQ06878.1
OmpA family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
       0.610
EAQ05836.1
Transcriptional regulator, GntR family; COG1802 Transcriptional regulators.
  
  
 0.561
EAQ06879.1
ADA regulatory protein; COG2207 AraC-type DNA-binding domain-containing proteins.
  
    0.497
xylB
Xylulose kinase; COG1070 Sugar (pentulose and hexulose) kinases.
     
 0.452
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
   
  
 0.441
EAQ06350.1
Multidrug (bicyclomycin) efflux pump, major facilitator superfamily (MFS); COG0477 Permeases of the major facilitator superfamily.
  
     0.440
EAQ08084.1
DNA-binding protein, putative; COG1396 Predicted transcriptional regulators.
 
  
 0.421
Your Current Organism:
Yoonia vestfoldensis SKA53
NCBI taxonomy Id: 314232
Other names: Loktanella vestfoldensis SKA53, Y. vestfoldensis SKA53
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